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FIND NewsletterIssue 10
 
June 2008

LAMP - a simple and highly sensitive molecular test for malaria

visual reading of amplified microorganisms Visual reading of amplified microorganisms using LAMP

Malaria is typically diagnosed by identifying parasites in a fingerprick blood sample using microscopy or by using an immunochromatographic rapid diagnostic test that detects parasite antigens. Both methods can perform well enough to direct standard malaria treatment (though microscopy is significantly more cumbersome), but neither is highly sensitive. Infections with fewer than 100 parasites per microliter of blood can be difficult to detect. In some settings, particularly in the diagnosis of complex cases referred to hospital, or in the case of pregnant women or other special patient groups, or in the setting of clinical trials of drugs or vaccines, more sensitive testing is needed to definitively rule out the presence of parasites in the blood.

Highly sensitive molecular assays such as the polymerase chain reaction (PCR) that can be used to amplify and detect small quantities of parasite DNA have been developed for malaria, but are not in common use because of the cost and complexity usually associated with testing by PCR. FIND has been working with Eiken Chemical Company, Ltd. in Japan for the past 3 years to develop a simple and highly sensitive molecular test for tuberculosis that it believes may be able to replace microscopy for detection of that disease. The Eiken technology, called LAMP (Loop-mediated isothermal AMPlification), allows rapid amplification and detection of a target genetic sequence with minimal instrumentation and simplified sample processing. Recently, FIND has moved to deploy that same technology platform for the detection of malaria.

Proof of principle for LAMP detection of malaria was published last year in Clinical Chemistry by Poon and colleagues (Clin Chem. 2006 Feb;52(2):303-6). FIND and Eiken have recently teamed up with experts at the Hospital for Tropical Diseases (HTD) in London to take these findings forward toward the development of a reference molecular test for malaria that could be used in district hospitals and regional laboratories. HTD is an internationally recognized institute dedicated to the prevention, diagnosis and treatment of tropical diseases and travel-related infections, and is the referral site for malaria care in London.

Under the agreement, a scientist from Eiken will join the HTD team in London for the coming year to facilitate the research and development work there. He will expect to return to London with a prototype assay completed. The goal is to develop a highly sensitive molecular test that can detect and distinguish P. falciparum from the other species of malaria directly from a fingerprick blood sample with minimal sample handling.